【6.1】nextNEOpi--新抗原的预测

一、安装

conda clean -i conda config –show

conda env create -f assets/nextNEOpi.yml

四、报错：

4.1 报错1

WARN: =============================================================================
  There is a problem with your Conda configuration!

  You will need to set-up the conda-forge and bioconda channels correctly.
  Please refer to https://bioconda.github.io/user/install.html#set-up-channels
  NB: The order of the channels matters!

(base) [sam@c01 nextNEOpi]$ cat  ~/.condarc
channels:
  - bioconda
  - conda-forge
  - defaults

更新为：

channels:
  - defaults
show_channel_urls: true
default_channels:
  - https://mirrors.bfsu.edu.cn/anaconda/pkgs/main
  - https://mirrors.bfsu.edu.cn/anaconda/pkgs/free
  - https://mirrors.bfsu.edu.cn/anaconda/pkgs/r
  - https://mirrors.bfsu.edu.cn/anaconda/pkgs/pro
  - https://mirrors.bfsu.edu.cn/anaconda/pkgs/msys2
custom_channels:
  conda-forge: https://mirrors.bfsu.edu.cn/anaconda/cloud
  msys2: https://mirrors.bfsu.edu.cn/anaconda/cloud
  bioconda: https://mirrors.bfsu.edu.cn/anaconda/cloud
  menpo: https://mirrors.bfsu.edu.cn/anaconda/cloud
  pytorch: https://mirrors.bfsu.edu.cn/anaconda/cloud
  simpleitk: https://mirrors.bfsu.edu.cn/anaconda/cloud

命令行：

conda clean -i
conda config --show

conda env create -f assets/nextNEOpi.yml

参考资料

• https://zhuanlan.zhihu.com/p/561209533